This is not unlike any other carb with a lean spot causing excess heat that leads to detonation or lube breakdown and seizure. All carbs work off a pressure difference but the Lectron has to luxury of one long smooth circuit via the metering rod that avoids the transitions present on other multi circuit carbs, these can cause rich/lean spots. Calling a Lectron "almost seizure proof" is misleading. If it's lean and ridden lean it will seize. If the fuel is poor quality running it richer will mask the poor fuel problem by lowering the temps that are causing the poor fuel to detonate. Raising and lowering the metering rod changes the air fuel ratio just like raising the needle, changing the pilot jet to a smaller size, changing the main jet to a smaller size or adjusting the air screw on a Mikuni or Keihn. This could very well be carb related but not likely because the carb is faulty. Most likely poor fuel set on the ragged edge of lean. Yes it could also be an air leak or other mechanical problem but consider this; My WR250 is set crisp and IMO perfect using VP110. I have 205psi of cranking compression which is enough that if something was to go wrong or I put crappy fuel in it it would not forgive me. If I turned my metering rod 1 turn leaner it would not run as good and I promise you my bike would seize by the end of a day's ride, Lectron or not. If I did this on pump gas bad things would happen even faster. The point I'm trying to make is if you find a specific spot where the bike wants to detonate then back out of the throttle and go home and fix it... Buy better fuel, lower the compression or set the carb richer because I can assure it isn't seize proof.
There are huge differences in how a metering rod carb and standard carb work. I could write volumes here but the main thing is the metering rod and slide are tied together where a jetted carb draws fuel from three circuits two of which are totally independent of the slide (air volume). Usually when you get the Lectron so lean it could seize the motor it will run so bad you wont be riding it anyway, it will not idle and it will not pull. As the rod is fixed to the slide there is a 1-1 relationship very unlike a standard carb as it pulls gas from several orifices. On a standard carb you can have a way small main jet and still open the slide all the way and cause a way lean condition. This does not happen on a Lectron. You would have to have a really bad rod design and some obvious and serious engine running issues before any of this can get out of hand. There is a ton more to it and it is nothing like a standard carb so you need to think differently. Your last sentence it spot on. Yes you can make the Lectron very lean and blow it up but you would have major signs this is the condition before it happened. One other think is that the Lectron will not plug jets (dirt or water) and run lean as it does not have any. there are huge differences and talking about a standard carb and this carb with the same methods does not work IMHO. As i said I am not saying it was not the carb but I'd personally be looking elsewhere for issues before blowing it up again. The seeming bad machining on the modified FBF head might have a lot to do with it. Seems several factors going on here. Bad gas, messed with FBF head, maybe tight piston tolerances, possible air leaks. Very simple to richen the carb up til it is obviously rich and then back off a little. You can also richen the top end independently with the PJ. Simple.